Stefan Kalkhof: search on Z-Library

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1

Authentication of nine poultry species using high-performance liquid chromatographyâtandem mass spectrometry

HÃ¤fner, Lukas, Kalkhof, Stefan, Jira, Wolfgang

Journal:

Year:

2021

File:

PDF, 1.60 MB

2021

2

Chances and pitfalls of chemical cross-linking with amine-reactiveN-hydroxysuccinimide esters

Stefan Kalkhof, Andrea Sinz

Journal:

Analytical and Bioanalytical Chemistry

Year:

2008

Language:

english

File:

PDF, 280 KB

english, 2008

3

Structural Insights into the Calmodulin−Munc13 Interaction Obtained by Cross-Linking and Mass Spectrometry

Dimova, Kalina, Kalkhof, Stefan, Pottratz, Ines, Ihling, Christian, Rodriguez-Castaneda, Fernando, Liepold, Thomas, Griesinger, Christian, Brose, Nils, Sinz, Andrea, Jahn, Olaf

Journal:

Year:

2009

Language:

english

File:

PDF, 4.65 MB

english, 2009

4

Structural analysis of the interleukin-8/glycosaminoglycan interactions by amide hydrogen/deuterium exchange mass spectrometry

Hofmann, Tommy, Samsonov, Sergey A., Pichert, Annelie, Lemmnitzer, Katharina, Schiller, Jürgen, Huster, Daniel, Pisabarro, M. Teresa, von Bergen, Martin, Kalkhof, Stefan

Journal:

Year:

2015

Language:

english

File:

PDF, 1.94 MB

english, 2015

5

In Depth Quantitative Proteomic and Transcriptomic Characterization of Human Adipocyte Differentiation Using the SGBS Cell Line

Kalkhof, Stefan, Krieg, Laura, BÃ¼ttner, Petra, Wabitsch, Martin, KÃ¼ntzel, Carolin, Friebe, Daniela, Landgraf, Kathrin, Hanschkow, Martha, Schubert, Kristin, Kiess, Wieland, Krohn, Knut, BlÃ¼her, Mat

Journal:

Year:

2020

File:

PDF, 1.07 MB

2020

6

Mapping Protein Interfaces by a Trifunctional Cross-Linker Combined with MALDI-TOF and ESI-FTICR Mass Spectrometry

Andrea Sinz, Stefan Kalkhof, Christian Ihling

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2005

Language:

english

File:

PDF, 425 KB

english, 2005

7

Determination of disulfide bond patterns in laminin β1 chain N-terminal domains by nano-high-performance liquid chromatography/matrix-assisted laser desorption/ionization time-of-flight/time-of-flight mass spectrometry

Stefan Kalkhof, Sebastian Haehn, Christian Ihling, Mats Paulsson, Neil Smyth, Andrea Sinz

Journal:

Rapid Communications in Mass Spectrometry

Year:

2008

Language:

english

File:

PDF, 272 KB

english, 2008

8

MEHP and MEOHP but not DEHP bind productively to the peroxisome proliferator-activated receptor γ

Kratochvil, Isabel, Hofmann, Tommy, Rother, Sandra, Schlichting, Rita, Moretti, Rocco, Scharnweber, Dieter, Hintze, Vera, Escher, Beate I., Meiler, Jens, Kalkhof, Stefan, von Bergen, Martin

Journal:

Rapid Communications in Mass Spectrometry

Year:

2018

Language:

english

File:

PDF, 1.24 MB

english, 2018

9

Common and phylogenetically widespread coding for peptides by bacterial small RNAs

Friedman, Robin C., Kalkhof, Stefan, Doppelt-Azeroual, Olivia, Mueller, Stephan A., Chovancová, Martina, von Bergen, Martin, Schwikowski, Benno

Journal:

Year:

2017

Language:

english

File:

PDF, 1.31 MB

english, 2017

10

DIGE-Based Protein Expression Analysis of B[a]P-Exposed Hepatoma Cells Reveals a Complex Stress Response Including Alterations in Oxidative Stress, Cell Cycle Control, and Cytoskeleton Motility at Toxic and Subacute Concentrations

Dautel, Franziska, Kalkhof, Stefan, Trump, Saskia, Michaelson, Jacob, Beyer, Andreas, Lehmann, Irina, von Bergen, Martin

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 3.61 MB

english, 2011

11

Conformational Landscapes of Ubiquitin, Cytochrome c, and Myoglobin: Uniform Field Ion Mobility Measurements in Helium and Nitrogen Drift Gas

May, Jody C., Jurneczko, Ewa, Stow, Sarah M., Kratochvil, Isabel, Kalkhof, Stefan, McLean, John A.

Journal:

International Journal of Mass Spectrometry

Year:

2017

Language:

english

File:

PDF, 1.21 MB

english, 2017

12

Sulfated hyaluronic acid and dexamethasone possess a synergistic potential in the differentiation of osteoblasts from human bone marrow stromal cells

Schmidt, Johannes R., Vogel, Sarah, Moeller, Stephanie, Kalkhof, Stefan, Schubert, Kristin, von Bergen, Martin, Hempel, Ute

Journal:

Journal of Cellular Biochemistry

Year:

2018

Language:

english

File:

PDF, 1.43 MB

english, 2018

13

Identification of new protein coding sequences and signal peptidase cleavage sites of Helicobacter pylori strain 26695 by proteogenomics

Müller, Stephan A., Findeiß, Sven, Pernitzsch, Sandy R., Wissenbach, Dirk K., Stadler, Peter F., Hofacker, Ivo L., von Bergen, Martin, Kalkhof, Stefan

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.95 MB

english, 2013

14

Protein structure prediction guided by crosslinking restraints – A systematic evaluation of the impact of the crosslinking spacer length

Hofmann, Tommy, Fischer, Axel W., Meiler, Jens, Kalkhof, Stefan

Journal:

Year:

2015

Language:

english

File:

PDF, 2.47 MB

english, 2015

15

Species determination ofCulicoidesbiting midges via peptide profiling using matrix-assisted laser desorption ionization mass spectrometry

Katrin R Uhlmann,Sebastian Gibb,Stefan Kalkhof,Uriel Arroyo-Abad…

Journal:

Parasites & Vectors

Year:

2014

Language:

english

File:

PDF, 2.94 MB

english, 2014

16

Rearrangement of the Extracellular Domain/Extracellular Loop 1 Interface Is Critical for Thyrotropin Receptor Activation

Schaarschmidt, Joerg, Nagel, Marcus B. M., Huth, Sandra, Jaeschke, Holger, Moretti, Rocco, Hintze, Vera, von Bergen, Martin, Kalkhof, Stefan, Meiler, Jens, Paschke, Ralf

Journal:

Journal of Biological Chemistry

Year:

2016

Language:

english

File:

PDF, 3.21 MB

english, 2016

17

Integrated additive design and manufacturing approach for the bioengineering of bone scaffolds for favorable mechanical and biological properties.

Valainis, Dvina, Dondl, Patrick, Foehr, Peter, Burgkart, Rainer, Kalkhof, Stefan, Duda, Georg N., van Griensven, Martijn, Poh, Patrina S.P.

Journal:

Biomedical Materials

Year:

2019

Language:

english

File:

PDF, 2.13 MB

english, 2019

18

Proteomics reveals sex-specific heat shock response of Baikal amphipod Eulimnogammarus cyaneus

Bedulina, Daria, Drozdova, Polina, Gurkov, Anton, von Bergen, Martin, Stadler, Peter F., Luckenbach, Till, Timofeyev, Maxim, Kalkhof, Stefan

Journal:

Science of The Total Environment

Year:

2020

File:

PDF, 1.95 MB

2020

19

Computational modeling of laminin N-terminal domains using sparse distance constraints from disulfide bonds and chemical cross-linking

Stefan Kalkhof, Sebastian Haehn, Mats Paulsson, Neil Smyth, Jens Meiler, Andrea Sinz

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 903 KB

english, 2010

20

Mapping protein interfaces by chemical cross-linking and FTICR mass spectrometry: application to a calmodulin / adenylyl cyclase 8 peptide complex

Schmidt, Andreas, Kalkhof, Stefan, Ihling, Christian, Cooper, Dermot, Sinz, Andrea

Journal:

European Journal of Mass Spectrometry

Year:

2005

Language:

english

File:

PDF, 234 KB

english, 2005

21

Hepatic co-cultures in vitro reveal suitable to detect Nrf2-mediated oxidative stress responses on the bladder carcinogen o -anisidine

Wewering, Franziska, Jouy, Florent, Caliskan, Sükran, Kalkhof, Stefan, von Bergen, Martin, Luch, Andreas, Zellmer, Sebastian

Journal:

Toxicology in Vitro

Year:

2017

Language:

english

File:

PDF, 770 KB

english, 2017

22

Isotope-Labeled Cross-Linkers and Fourier Transform Ion Cyclotron Resonance Mass Spectrometry for Structural Analysis of a Protein/Peptide Complex

Christian Ihling, Andreas Schmidt, Stefan Kalkhof, Daniela M. Schulz, Christoph Stingl, Karl Mechtler, Michael Haack, Annette G. Beck-Sickinger, Dermot M.F. Cooper, Andrea Sinz

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2006

Language:

english

File:

PDF, 507 KB

english, 2006

23

Concentration–response concept in ecotoxicoproteomics: Effects of different phenanthrene concentrations to the zebrafish (Danio rerio) embryo proteome

Ulrike Gündel, Stefan Kalkhof, Dimitar Zitzkat, Martin von Bergen, Rolf Altenburger, Eberhard Küster

Journal:

Ecotoxicology and Environmental Safety

Year:

2012

Language:

english

File:

PDF, 665 KB

english, 2012

24

Stable isotope labeling by amino acids in cell culture based proteomics reveals differences in protein abundances between spiral and coccoid forms of the gastric pathogen Helicobacter pylori

Müller, Stephan A., Pernitzsch, Sandy R., Haange, Sven-Bastiaan, Uetz, Peter, von Bergen, Martin, Sharma, Cynthia M., Kalkhof, Stefan

Journal:

Journal of Proteomics

Year:

2015

Language:

english

File:

PDF, 1.24 MB

english, 2015

25

Requirements and Perspectives for Integrating Metabolomics with other Omics Data

Baumann, Sven, Kalkhof, Stefan, Hackermuller, Jorg, Otto, Wolfgang, Melanie Tomm, Janina, Klaus Wissenbach, Dirk, Rolle-Kampczyk, Ulrike, von Bergen, Martin

Journal:

Current Metabolomics

Year:

2012

Language:

english

File:

PDF, 615 KB

english, 2012

26

Annexin A2/P11 interaction: New insights into annexin A2 tetramer structure by chemical crosslinking, high-resolution mass spectrometry, and computational modeling

Daniela M. Schulz, Stefan Kalkhof, Andreas Schmidt, Christian Ihling, Christoph Stingl, Karl Mechtler, Olaf Zschörnig, Andrea Sinz

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 686 KB

english, 2007

27

Quantitative proteomics reveals novel functions of osteoclast-associated receptor in STAT signaling and cell adhesion in human endothelial cells

Claudia Goettsch, Stefanie Kliemt, Kathrin Sinningen, Martin von Bergen, Lorenz C. Hofbauer, Stefan Kalkhof

Journal:

Journal of Molecular and Cellular Cardiology

Year:

2012

Language:

english

File:

PDF, 932 KB

english, 2012

28

Chemical Cross-Linking and High-Performance Fourier Transform Ion Cyclotron Resonance Mass Spectrometry for Protein Interaction Analysis: Application to a Calmodulin/Target Peptide Complex

Kalkhof, Stefan, Ihling, Christian, Mechtler, Karl, Sinz, Andrea

Journal:

Analytical Chemistry

Year:

2005

Language:

english

File:

PDF, 408 KB

english, 2005

29

Characterization of chemical-induced sterile inflammation in vitro: application of the model compound ketoconazole in a human hepatic co-culture system

Wewering, Franziska, Jouy, Florent, Wissenbach, Dirk K., Gebauer, Scarlett, Blüher, Matthias, Gebhardt, Rolf, Pirow, Ralph, von Bergen, Martin, Kalkhof, Stefan, Luch, Andreas, Zellmer, Sebastian

Journal:

Archives of Toxicology

Year:

2017

Language:

english

File:

PDF, 956 KB

english, 2017

30

Chemisches Cross-Linking und MS zur Untersuchung von Proteinkomplexen

Sabine Schaks, Stefan Kalkhof, Fabian Krauth, Olaf Jahn, Andrea Sinz

Journal:

Year:

2011

Language:

german

File:

PDF, 332 KB

german, 2011

31

Microdialysis Sampling from Wound Fluids Enables Quantitative Assessment of Cytokines, Proteins, and Metabolites Reveals Bone Defect-Specific Molecular Profiles

Förster, Yvonne, Schmidt, Johannes R., Wissenbach, Dirk K., Pfeiffer, Susanne E. M., Baumann, Sven, Hofbauer, Lorenz C., von Bergen, Martin, Kalkhof, Stefan, Rammelt, Stefan, Howdieshell, Thomas R.

Journal:

Year:

2016

Language:

english

File:

PDF, 2.37 MB

english, 2016

32

Pathway and Time-Resolved Benzo[ a ]pyrene Toxicity on Hepa1c1c7 Cells at Toxic and Subtoxic Exposure

Kalkhof, Stefan, Dautel, Franziska, Loguercio, Salvatore, Baumann, Sven, Trump, Saskia, Jungnickel, Harald, Otto, Wolfgang, Rudzok, Susanne, Potratz, Sarah, Luch, Andreas, Lehmann, Irina, Beyer, Andre

Journal:

Journal of Proteome Research

Year:

2015

Language:

english

File:

PDF, 3.08 MB

english, 2015

33

Detection of biomarkers to differentiate endocrine disruption from hepatotoxicity in zebrafish (Danio rerio) using proteomics

Ayobahan, Steve U., Eilebrecht, Sebastian, Baumann, Lisa, Teigeler, Matthias, Hollert, Henner, Kalkhof, Stefan, Eilebrecht, Elke, Schäfers, Christoph

Journal:

Year:

2020

Language:

english

File:

PDF, 2.46 MB

english, 2020

34

The effect of the degree of sulfation of glycosaminoglycans on osteoclast function and signaling pathways

Juliane Salbach, Stefanie Kliemt, Martina Rauner, Tilman D. Rachner, Claudia Goettsch, Stefan Kalkhof, Martin von Bergen, Stephanie Möller, Matthias Schnabelrauch, Vera Hintze, Dieter Scharnweber, Lor

Journal:

Year:

2012

Language:

english

File:

PDF, 1.90 MB

english, 2012

35

Proteome changes in human bronchoalveolar cells following styrene exposure indicate involvement of oxidative stress in the molecular-response mechanism

Nora Mörbt, Iljana Mögel, Stefan Kalkhof, Ralph Feltens, Carmen Röder-Stolinski, Jiang Zheng, Carsten Vogt, Irina Lehmann, Martin von Bergen

Journal:

Year:

2009

Language:

english

File:

PDF, 581 KB

english, 2009

36

Structural and functional insights into the interaction of sulfated glycosaminoglycans with tissue inhibitor of metalloproteinase-3 – a possible regulatory role on extracellular matrix homeostasis

Rother, Sandra, Samsonov, Sergey A., Hofmann, Tommy, Blaszkiewicz, Joanna, Köhling, Sebastian, Moeller, Stephanie, Schnabelrauch, Matthias, Rademann, Jörg, Kalkhof, Stefan, von Bergen, Martin, Teresa

Journal:

Acta Biomaterialia

Year:

2016

Language:

english

File:

PDF, 7.02 MB

english, 2016

37

Mitochondrial Transfer by Human Mesenchymal Stromal Cells Ameliorates Hepatocyte Lipid Load in a Mouse Model of NASH

Hsu, Mei-Ju, Karkossa, Isabel, SchÃ¤fer, Ingo, Christ, Madlen, KÃ¼hne, Hagen, Schubert, Kristin, Rolle-Kampczyk, Ulrike E., Kalkhof, Stefan, Nickel, Sandra, Seibel, Peter, von Bergen, Martin, Christ,

Journal:

Year:

2020

File:

PDF, 6.57 MB

2020

38

Optimization of parameters for coverage of low molecular weight proteins

Stephan A. Müller, Tibor Kohajda, Sven Findeiß, Peter F. Stadler, Stefan Washietl, Manolis Kellis, Martin von Bergen, Stefan Kalkhof

Journal:

Analytical and Bioanalytical Chemistry

Year:

2010

Language:

english

File:

PDF, 737 KB

english, 2010

39

Sulfated hyaluronan attenuates inflammatory signaling pathways in macrophages involving induction of antioxidants

Jouy, Florent, Lohmann, Nadine, Wandel, Elke, Ruiz-Gómez, Gloria, Pisabarro, M. Teresa, Beck-Sickinger, Annette G., Schnabelrauch, Matthias, Moeller, Stephanie, Simon, Jan C., Kalkhof, Stefan, von Ber

Journal:

Year:

2017

Language:

english

File:

PDF, 1.44 MB

english, 2017

40

Sulfated Hyaluronan Containing Collagen Matrices Enhance Cell-Matrix-Interaction, Endocytosis, and Osteogenic Differentiation of Human Mesenchymal Stromal Cells

Kliemt, Stefanie, Lange, Claudia, Otto, Wolfgang, Hintze, Vera, Möller, Stephanie, von Bergen, Martin, Hempel, Ute, Kalkhof, Stefan

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 1.17 MB

english, 2013

41

A Novel Disulfide Pattern in Laminin-Type Epidermal Growth Factor-like (LE) Modules of Laminin β1 and γ1 Chains

Kalkhof, Stefan, Witte, Konstanze, Ihling, Christian H., Müller, Mathias Q., Keller, Manuel V., Haehn, Sebastian, Smyth, Neil, Paulsson, Mats, Sinz, Andrea

Journal:

Year:

2010

Language:

english

File:

PDF, 1.47 MB

english, 2010

42

Subtoxic and toxic concentrations of benzene and toluene induce Nrf2-mediated antioxidative stress response and affect the central carbon metabolism in lung epithelial cells A549

Murugesan, Kalaimathi, Baumann, Sven, Wissenbach, Dirk K., Kliemt, Stefanie, Kalkhof, Stefan, Otto, Wolfgang, Mögel, Iljana, Kohajda, Tibor, von Bergen, Martin, Tomm, Janina M.

Journal:

Year:

2013

Language:

english

File:

PDF, 962 KB

english, 2013

43

Proteomics and Metabolomics for In Situ Monitoring of Wound Healing

Kalkhof, Stefan, Förster, Yvonne, Schmidt, Johannes, Schulz, Matthias C., Baumann, Sven, Weißflog, Anne, Gao, Wenling, Hempel, Ute, Eckelt, Uwe, Rammelt, Stefan, von Bergen, Martin

Journal:

BioMed Research International

Year:

2014

Language:

english

File:

PDF, 921 KB

english, 2014

44

Osteoblast-released Matrix Vesicles, Regulation of Activity and Composition by Sulfated and Non-sulfated Glycosaminoglycans

Schmidt, Johannes R., Kliemt, Stefanie, Preissler, Carolin, Moeller, Stephanie, von Bergen, Martin, Hempel, Ute, Kalkhof, Stefan

Journal:

Molecular & Cellular Proteomics

Year:

2016

Language:

english

File:

PDF, 1.23 MB

english, 2016

45

Analysis of the STAT3 interactome using in-situ biotinylation and SILAC

Blumert, Conny, Kalkhof, Stefan, Brocke-Heidrich, Katja, Kohajda, Tibor, von Bergen, Martin, Horn, Friedemann

Journal:

Journal of Proteomics

Year:

2013

Language:

english

File:

PDF, 1.18 MB

english, 2013

46

PIPINO: A Software Package to Facilitate the Identification of Protein-Protein Interactions from Affinity Purification Mass Spectrometry Data

Kalkhof, Stefan, Schildbach, Stefan, Blumert, Conny, Horn, Friedemann, von Bergen, Martin, Labudde, Dirk

Journal:

BioMed Research International

Year:

2016

Language:

english

File:

PDF, 4.97 MB

english, 2016

47

Discrimination of different species from the genusDrosophilaby intact protein profiling using matrix-assisted laser desorption ionization mass spectrometry

Ralph Feltens, Renate Görner, Stefan Kalkhof, Helke Gröger-Arndt, Martin von Bergen

Journal:

BMC Evolutionary Biology

Year:

2010

Language:

english

File:

PDF, 2.05 MB

english, 2010

48

Chlorinated Benzenes Cause Concomitantly Oxidative Stress and Induction of Apoptotic Markers in Lung Epithelial Cells (A549) at Nonacute Toxic Concentrations

Mörbt, Nora, Tomm, Janina, Feltens, Ralph, Mögel, Iljana, Kalkhof, Stefan, Murugesan, Kalaimathi, Wirth, Henry, Vogt, Carsten, Binder, Hans, Lehmann, Irina, von Bergen, Martin

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 3.06 MB

english, 2011

49

Proteome data improves protein function prediction in the interactome of H. pylori

Wuchty, Stefan, Mueller, Stephan, Caufield, Harry, Haeuser, Roland, Aloy, Patrick, Kalkhof, Stefan, Uetz, Peter

Journal:

Molecular & Cellular Proteomics

Year:

2018

Language:

english

File:

PDF, 18.38 MB

english, 2018

50

A cleavable cytolysin–neuropeptide Y bioconjugate enables specific drug delivery and demonstrates intracellular mode of action

Ahrens, Verena M., Kostelnik, Katja B., Rennert, Robert, Böhme, David, Kalkhof, Stefan, Kosel, David, Weber, Lutz, von Bergen, Martin, Beck-Sickinger, Annette G.

Journal:

Journal of Controlled Release

Year:

2015

Language:

english

File:

PDF, 557 KB

english, 2015

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